Aliases : OTP84
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g16785 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g31192 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g36030 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g36208 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Dac_g30466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g39841 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g45930 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g03998 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g05349 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g36364 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g49830.1 | LOC_Os02g49830 | Pentatricopeptide repeat-containing protein At3g22690... | 0.02 | OrthoFinder output from all 47 species | |
Len_g40021 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g03526 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g27928 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g34702 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g13386 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g06981 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g28712 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g56302 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0019.g007869 | No alias | not classified & original description: CDS=1-2253 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g26415 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g30057 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g53482 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g53491 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g54422 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g56258 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000439 | transcription factor TFIIH core complex | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
BP | GO:0050896 | response to stimulus | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 499 | 522 |
IPR002885 | Pentatricopeptide_repeat | 221 | 251 |
IPR002885 | Pentatricopeptide_repeat | 193 | 214 |
IPR002885 | Pentatricopeptide_repeat | 527 | 556 |
IPR002885 | Pentatricopeptide_repeat | 91 | 113 |
IPR002885 | Pentatricopeptide_repeat | 320 | 368 |
IPR002885 | Pentatricopeptide_repeat | 116 | 163 |
IPR002885 | Pentatricopeptide_repeat | 422 | 469 |
No external refs found! |