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  5. Tin_g43905

Tin_g43905 (SSI1, ATSS1, SSI)


Aliases : SSI1, ATSS1, SSI

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0001429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001429_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g43905
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Aev_g04105 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23997 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08363 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69405 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00058.t1 SS2, AtSS2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29973 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cre04.g215150 SSI1, ATSS1, SSI Enzyme classification.EC_2 transferases.EC_2.4... 0.01 OrthoFinder output from all 47 species
Dcu_g04884 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g51070.1 SS2, AtSS2,... starch synthase (SSII) 0.05 OrthoFinder output from all 47 species
Lfl_g01990 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38859 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06738 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61350 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06445 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50354 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 132 389
IPR001296 Glyco_trans_1 445 583
No external refs found!