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  5. Tin_g42771

Tin_g42771


Description : histone *(H4) & original description: none


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g42771
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00201000 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00220160 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
AT1G07820 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G28740 HIS4 histone H4 0.06 OrthoFinder output from all 47 species
AT3G45930 No alias Histone superfamily protein 0.09 OrthoFinder output from all 47 species
AT3G46320 No alias Histone superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G53730 No alias Histone superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G59690 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G59970 No alias Histone superfamily protein 0.07 OrthoFinder output from all 47 species
Adi_g006378 No alias histone *(H4) & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g013963 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068069 No alias histone *(H4) & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g128464 No alias histone *(H4) & original description: none 0.1 OrthoFinder output from all 47 species
Als_g31946 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17108.t1 Aspi01Gene17108 histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007998 No alias histone *(H4) & original description: CDS=1-342 0.03 OrthoFinder output from all 47 species
Ceric.05G005700.1 Ceric.05G005700 histone *(H4) & original description: pacid=50578064... 0.01 OrthoFinder output from all 47 species
Ceric.11G079500.1 Ceric.11G079500 histone *(H4) & original description: pacid=50595239... 0.02 OrthoFinder output from all 47 species
Ceric.12G065600.1 Ceric.12G065600 histone *(H4) & original description: pacid=50601973... 0.03 OrthoFinder output from all 47 species
Ceric.12G065700.1 Ceric.12G065700 histone *(H4) & original description: pacid=50601214... 0.04 OrthoFinder output from all 47 species
Ceric.12G080900.1 Ceric.12G080900 histone *(H4) & original description: pacid=50601464... 0.04 OrthoFinder output from all 47 species
Ceric.12G081100.1 Ceric.12G081100 histone *(H4) & original description: pacid=50601273... 0.02 OrthoFinder output from all 47 species
Ceric.14G089900.1 Ceric.14G089900 histone *(H4) & original description: pacid=50633501... 0.04 OrthoFinder output from all 47 species
Ceric.28G045100.1 Ceric.28G045100 histone *(H4) & original description: pacid=50570632... 0.02 OrthoFinder output from all 47 species
Ceric.29G054900.1 Ceric.29G054900 histone *(H4) & original description: pacid=50625709... 0.03 OrthoFinder output from all 47 species
Ceric.29G055000.1 Ceric.29G055000 histone *(H4) & original description: pacid=50624348... 0.03 OrthoFinder output from all 47 species
Ceric.38G017000.1 Ceric.38G017000 histone *(H4) & original description: pacid=50580621... 0.04 OrthoFinder output from all 47 species
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre16.g650250 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Dac_g11115 No alias histone *(H4) & original description: none 0.18 OrthoFinder output from all 47 species
GSVIVT01016576001 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
GSVIVT01016577001 No alias Chromatin organisation.histones.H4-type histone 0.1 OrthoFinder output from all 47 species
GSVIVT01016578001 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
GSVIVT01025005001 No alias Chromatin organisation.histones.H4-type histone 0.11 OrthoFinder output from all 47 species
GSVIVT01032631001 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
GSVIVT01034208001 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Gb_10373 No alias histone (H4) 0.09 OrthoFinder output from all 47 species
Gb_10374 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Gb_15454 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Gb_15458 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Gb_21914 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Gb_21918 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Gb_25031 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os01g61920.1 LOC_Os01g61920 histone (H4) 0.05 OrthoFinder output from all 47 species
LOC_Os02g45940.1 LOC_Os02g45940 histone (H4) 0.05 OrthoFinder output from all 47 species
LOC_Os03g02780.1 LOC_Os03g02780 histone (H4) 0.06 OrthoFinder output from all 47 species
LOC_Os04g49420.1 LOC_Os04g49420 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os05g38740.1 LOC_Os05g38740 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os05g39050.1 LOC_Os05g39050 histone (H4) 0.03 OrthoFinder output from all 47 species
LOC_Os07g36500.1 LOC_Os07g36500 histone (H4) 0.04 OrthoFinder output from all 47 species
LOC_Os09g26340.1 LOC_Os09g26340 histone (H4) 0.06 OrthoFinder output from all 47 species
LOC_Os09g38020.1 LOC_Os09g38020 histone (H4) 0.05 OrthoFinder output from all 47 species
LOC_Os10g39410.1 LOC_Os10g39410 histone (H4) 0.02 OrthoFinder output from all 47 species
Len_g03946 No alias histone *(H4) & original description: none 0.15 OrthoFinder output from all 47 species
Len_g55897 No alias histone *(H4) & original description: none 0.08 OrthoFinder output from all 47 species
MA_10427181g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_10428142g0010 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
MA_10433778g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_116904g0010 No alias histone (H4) 0.05 OrthoFinder output from all 47 species
MA_12995g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_141877g0030 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_234535g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_2559098g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_465285g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_713159g0010 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
MA_74102g0010 No alias histone (H4) 0.07 OrthoFinder output from all 47 species
MA_89764g0010 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
MA_97951g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Mp4g03090.1 No alias histone (H4) 0.1 OrthoFinder output from all 47 species
Mp4g13440.1 No alias histone (H4) 0.06 OrthoFinder output from all 47 species
Mp5g16840.1 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Mp5g22460.1 No alias histone (H4) 0.06 OrthoFinder output from all 47 species
Mp5g22470.1 No alias histone (H4) 0.06 OrthoFinder output from all 47 species
Pp3c22_22340V3.1 Pp3c22_22340 histone H4 0.02 OrthoFinder output from all 47 species
Pp3c4_22160V3.1 Pp3c4_22160 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c7_22150V3.1 Pp3c7_22150 histone H4 0.01 OrthoFinder output from all 47 species
Ppi_g12063 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06107 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38432 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Smo150847 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Smo167497 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Smo233579 No alias Chromatin organisation.histones.H4-type histone 0.04 OrthoFinder output from all 47 species
Solyc04g011390.1.1 Solyc04g011390 histone (H4) 0.04 OrthoFinder output from all 47 species
Solyc05g054610.1.1 Solyc05g054610 histone (H4) 0.07 OrthoFinder output from all 47 species
Solyc06g005420.1.1 Solyc06g005420 histone (H4) 0.07 OrthoFinder output from all 47 species
Solyc06g005430.1.1 Solyc06g005430 histone (H4) 0.06 OrthoFinder output from all 47 species
Solyc06g072240.1.1 Solyc06g072240 histone (H4) 0.07 OrthoFinder output from all 47 species
Solyc06g075830.2.1 Solyc06g075830 histone (H4) 0.05 OrthoFinder output from all 47 species
Solyc06g075850.1.1 Solyc06g075850 histone (H4) 0.06 OrthoFinder output from all 47 species
Solyc06g075930.1.1 Solyc06g075930 histone (H4) 0.05 OrthoFinder output from all 47 species
Solyc06g075960.1.1 Solyc06g075960 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc11g066160.1.1 Solyc11g066160 histone (H4) 0.07 OrthoFinder output from all 47 species
Solyc11g072840.1.1 Solyc11g072840 histone (H4) 0.05 OrthoFinder output from all 47 species
Solyc11g072860.2.1 Solyc11g072860 histone (H4) 0.08 OrthoFinder output from all 47 species
Spa_g35494 No alias histone *(H4) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g53626 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007138_P001 Zm00001e007138 histone (H4) 0.07 OrthoFinder output from all 47 species
Zm00001e009859_P001 Zm00001e009859 histone (H4) 0.05 OrthoFinder output from all 47 species
Zm00001e016816_P001 Zm00001e016816 histone (H4) 0.04 OrthoFinder output from all 47 species
Zm00001e019368_P001 Zm00001e019368 histone (H4) 0.03 OrthoFinder output from all 47 species
Zm00001e023245_P001 Zm00001e023245 histone (H4) 0.06 OrthoFinder output from all 47 species
Zm00001e025845_P001 Zm00001e025845 histone (H4) 0.04 OrthoFinder output from all 47 species
Zm00001e027269_P001 Zm00001e027269 histone (H4) 0.03 OrthoFinder output from all 47 species
Zm00001e034229_P001 Zm00001e034229 histone (H4) 0.05 OrthoFinder output from all 47 species
Zm00001e034230_P001 Zm00001e034230 histone (H4) 0.04 OrthoFinder output from all 47 species
Zm00001e034964_P001 Zm00001e034964 histone (H4) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051095 regulation of helicase activity IEP HCCA
BP GO:0051097 negative regulation of helicase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1905462 regulation of DNA duplex unwinding IEP HCCA
BP GO:1905463 negative regulation of DNA duplex unwinding IEP HCCA
BP GO:1905774 regulation of DNA helicase activity IEP HCCA
BP GO:1905775 negative regulation of DNA helicase activity IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 94
No external refs found!