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  5. Tin_g42504

Tin_g42504


Description : not classified & original description: none


Gene families : OG0000298 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000298_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g42504

Target Alias Description ECC score Gene Family Method Actions
Aev_g19059 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene60429.t1 ORF158, Aspi01Gene60429 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61828.t1 Aspi01Gene61828 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g73377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z189400.1 Ceric.1Z189400 not classified & original description: pacid=50637395... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021518.15 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g19345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_04999 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_16711 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_25910 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g35944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g32598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20331 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR041373 RT_RNaseH 2 49
No external refs found!