Smo442126 (PACid_15408391)


Aliases : PACid_15408391

Description : 27.1 RNA.processing Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species. HASTY (HST) CONTAINS InterPro DOMAIN/s: Exportin-1/Importin-beta-like (InterPro:IPR013598), Armadillo-type fold (InterPro:IPR016024) Has 520 Blast hits to 417 proteins in 141 species: Archae - 0 Bacteria - 0 Metazoa - 205 Fungi - 183 Plants - 102 Viruses - 0 Other Eukaryotes - 30 (source: NCBI BLink). & (loc_os01g26160.1 : 759.0


Gene families : OG_01_0003307 (Gene family) Phylogenetic Tree(s): OG0003307_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo442126
Cluster HCCA cluster: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT3G05040 HST, HST1 ARM repeat superfamily protein 0.05 Gene family
Cpa|evm.model.tig00000523.41 No alias 27.1 RNA.processing Encodes member of importin/exportin... 0.01 Gene family
Cre10.g420250 No alias No description available 0.05 Gene family
GSVIVT01021908001 No alias 27.1 RNA.processing Encodes member of importin/exportin... 0.02 Gene family
LOC_Os01g26160 Os01g0363900 27.1 RNA.processing Encodes member of importin/exportin... 0.02 Gene family
MA_10436866g0010 No alias 27.1 RNA.processing Encodes member of importin/exportin... 0.02 Gene family
MA_39570g0010 No alias 27.1 RNA.processing Encodes member of importin/exportin... 0.02 Gene family
Solyc01g098170.3.1 Solyc01g098170.3 27.1 RNA.processing Encodes member of importin/exportin... 0.06 Gene family
Zm00001d009270 GRMZM2G043238 27.1 RNA.processing Encodes member of importin/exportin... 0.07 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013598 Exportin-1/Importin-b-like 102 259
No external refs found!