Aliases : ATHM4, TRX-M4, ATM4
Description : not classified & original description: none
Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g40832 | |
Cluster | HCCA: Cluster_117 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g37313 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g42626 | TRXH2, TRX2,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g54864 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g60394 | ATTRX3, ATTRXH3,... | protein-S-nitrosothiol reductase *(TRX5) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g34139 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g28524 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g29484 | ATH9, TH9, TRX H9 | H-type thioredoxin *(Trx-H) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g39810 | ATTRX4, ATH4 | H-type thioredoxin *(Trx-H) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g38672 | ATTRX1, ATTRX H1, TRX1 | H-type thioredoxin *(Trx-H) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g39759 | TRXH2, TRX2,... | H-type thioredoxin *(Trx-H) & original description: none | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0004112 | cyclic-nucleotide phosphodiesterase activity | IEP | HCCA |
MF | GO:0004114 | 3',5'-cyclic-nucleotide phosphodiesterase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013766 | Thioredoxin_domain | 8 | 98 |
No external refs found! |