AMTR_s00017p00164980 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00017.81

Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG_01_0000057 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000057_tree ,
OG_02_0000418 (LandPlants) Phylogenetic Tree(s): OG_02_0000418_tree ,
OG_03_0000295 (SeedPlants) Phylogenetic Tree(s): OG_03_0000295_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00017p00164980
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00132920 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00090p00165440 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AT5G46540 PGP7 P-glycoprotein 7 0.02 Archaeplastida
Gb_13906 No alias subfamily ABCB transporter 0.08 Archaeplastida
Gb_13908 No alias ABC transporter B family member 10 OS=Arabidopsis... 0.03 Archaeplastida
Gb_23626 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_10432169g0010 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_61717g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_93218g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g21430.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Pp3c12_11230V3.1 No alias ATP binding cassette subfamily B4 0.02 Archaeplastida
Smo230688 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT5G46540 PGP7 P-glycoprotein 7 0.02 LandPlants
MA_10432169g0010 No alias subfamily ABCB transporter 0.03 LandPlants
Pp3c12_11230V3.1 No alias ATP binding cassette subfamily B4 0.02 LandPlants
Smo176522 No alias Solute transport.primary active transport.ABC... 0.02 LandPlants
MA_10432169g0010 No alias subfamily ABCB transporter 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006810 transport IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1077 1203
IPR003439 ABC_transporter-like 409 534
No external refs found!