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  5. Tin_g40344

Tin_g40344


Description : A1-class (Pepsin) protease & original description: none


Gene families : OG0000057 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g40344

Target Alias Description ECC score Gene Family Method Actions
Aob_g25700 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g54435 CDR1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g42320.1 LOC_Os01g42320 pepsin-type protease 0.02 OrthoFinder output from all 47 species
LOC_Os06g20040.1 LOC_Os06g20040 pepsin-type protease 0.02 OrthoFinder output from all 47 species
LOC_Os08g36530.1 LOC_Os08g36530 pepsin-type protease 0.02 OrthoFinder output from all 47 species
MA_10293g0010 No alias pepsin-type protease 0.02 OrthoFinder output from all 47 species
MA_15755g0030 No alias pepsin-type protease 0.02 OrthoFinder output from all 47 species
MA_659259g0010 CDR1 pepsin-type protease 0.02 OrthoFinder output from all 47 species
MA_86776g0010 No alias pepsin-type protease 0.03 OrthoFinder output from all 47 species
Mp3g04580.1 No alias pepsin-type protease 0.02 OrthoFinder output from all 47 species
Mp3g12890.1 No alias pepsin-type protease 0.02 OrthoFinder output from all 47 species
Mp3g18040.1 No alias pepsin-type protease 0.03 OrthoFinder output from all 47 species
Mp3g20930.1 No alias pepsin-type protease 0.02 OrthoFinder output from all 47 species
Mp5g12090.1 No alias pepsin-type protease 0.02 OrthoFinder output from all 47 species
Mp5g16410.1 No alias pepsin-type protease 0.03 OrthoFinder output from all 47 species
Smo75184 No alias Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
Solyc06g069220.1.1 Solyc06g069220 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Solyc10g009410.1.1 Solyc10g009410 pepsin-type protease 0.02 OrthoFinder output from all 47 species
Zm00001e015671_P001 Zm00001e015671 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Zm00001e030794_P001 Zm00001e030794 pepsin-type protease 0.02 OrthoFinder output from all 47 species
Zm00001e034491_P001 Zm00001e034491 pepsin-type protease 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR032799 TAXi_C 295 446
IPR032861 TAXi_N 56 271
No external refs found!