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  5. Tin_g40244

Tin_g40244


Description : not classified & original description: none


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g40244

Target Alias Description ECC score Gene Family Method Actions
AT5G27650 No alias Tudor/PWWP/MBT superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G40340 No alias Tudor/PWWP/MBT superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g017529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05168 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g11396 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Als_g21623 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g29262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13645 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g17586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10648 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g64510 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g13826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G017200.1 Ceric.03G017200 not classified & original description: pacid=50571554... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.25 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre06.g270700 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g08295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19973 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_40891 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g38810.1 LOC_Os05g38810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g12919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10197194g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10434021g0020 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_8546g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g20276 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g43747 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g02506 No alias EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Nbi_g03857 No alias N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.05 OrthoFinder output from all 47 species
Nbi_g13020 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g14266 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g24316 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g46989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02419 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56829 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001848 No alias not classified & original description: CDS=1-3909 0.03 OrthoFinder output from all 47 species
Solyc01g099360.3.1 Solyc01g099360 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g15700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e027258_P002 Zm00001e027258 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e031849_P002 Zm00001e031849 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 971 1054
No external refs found!