Tin_g40006

Description : EC_3.4 hydrolase acTing on peptide bond (peptidase) & original description: none

Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g40006
Cluster	HCCA: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
AT1G29080	No alias	Papain family cysteine protease	0.02	OrthoFinder output from all 47 species
Aev_g00916	XBCP3	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Als_g38576	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Aop_g59840	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
GSVIVT01000582001	No alias	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
LOC_Os04g55650.1	LOC_Os04g55650	Oryzain alpha chain OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
Len_g48307	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
MA_953519g0010	XCP1	Caricain OS=Carica papaya (sp\|p10056\|papa3_carpa :...	0.02	OrthoFinder output from all 47 species
Tin_g40251	No alias	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000668	Peptidase_C1A_C	1	101

External Links

No external refs found!