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  5. Tin_g39847

Tin_g39847 (RCD3, CDI3, SLAC1, OZS1)


Aliases : RCD3, CDI3, SLAC1, OZS1

Description : anion channel *(SLAC) & original description: none


Gene families : OG0000650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g39847
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00198820 RCD3, CDI3,... Solute transport.channels.SLAC anion channel 0.03 OrthoFinder output from all 47 species
AMTR_s00075p00061010 SLAH3,... Solute transport.channels.SLAC anion channel 0.02 OrthoFinder output from all 47 species
AT1G62262 SLAH4 SLAC1 homologue 4 0.05 OrthoFinder output from all 47 species
AT4G27970 SLAH2 SLAC1 homologue 2 0.02 OrthoFinder output from all 47 species
Ala_g21568 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31820 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34210 SLAH3 anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17537 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0019.g015208 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: CDS=79-1608 0.04 OrthoFinder output from all 47 species
Azfi_s0107.g045141 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: CDS=407-2764 0.05 OrthoFinder output from all 47 species
Azfi_s1105.g097655 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: CDS=80-1609 0.03 OrthoFinder output from all 47 species
Dac_g35133 RCD3, CDI3, SLAC1, OZS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18127 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.04 OrthoFinder output from all 47 species
Gb_39869 RCD3, CDI3, SLAC1, OZS1 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
LOC_Os01g14520.1 SLAH1, LOC_Os01g14520 anion channel (SLAC) 0.05 OrthoFinder output from all 47 species
LOC_Os05g13320.1 SLAH3, LOC_Os05g13320 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
MA_175194g0010 RCD3, CDI3, SLAC1, OZS1 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Ore_g03145 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06463 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59811 SLAH3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25171 No alias anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38748 No alias anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g031590.4.1 SLAH1, Solyc03g031590 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Tin_g20239 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020426_P001 SLAH3, Zm00001e020426 anion channel (SLAC) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004695 SLAC1/Mae1/Ssu1/TehA 263 565
No external refs found!