Smo441095 (PACid_15404835)


Aliases : PACid_15404835

Description : 27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ATRX FUNCTIONS IN: helicase activity, DNA binding, ATP binding, nucleic acid binding EXPRESSED IN: 24 plant structures EXPRESSED DURING: 15 growth stages CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330) BEST Arabidopsis thaliana protein match is: homolog of RAD54 (TAIR:AT3G19210.1). & (loc_os10g31970.1 : 683.0


Gene families : OG_01_0003907 (Gene family) Phylogenetic Tree(s): OG0003907_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo441095
Cluster HCCA cluster: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021760.3 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.02 Gene family
GSVIVT01023393001 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.06 Gene family
LOC_Os10g31970 Os10g0457700 27.3.44 RNA.regulation of transcription.Chromatin... 0.03 Gene family
Solyc04g050150.3.1 Solyc04g050150.3 27.3.44 RNA.regulation of transcription.Chromatin... 0.06 Gene family
Zm00001d032801 GRMZM2G049766,... 27.3.44 RNA.regulation of transcription.Chromatin... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007011 SMP 1854 1897
No external refs found!