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Description : pre-60S ribosomal subunit assembly factor *(NOP15) & original description: none
Gene families : OG0005172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005172_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g38815 | |
| Cluster | HCCA: Cluster_73 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os08g31810.3 | LOC_Os08g31810 | pre-60S ribosomal subunit assembly factor (NOP15) | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05930 | No alias | pre-60S ribosomal subunit assembly factor *(NOP15) &... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004668 | protein-arginine deiminase activity | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006576 | biogenic amine metabolic process | IEP | HCCA |
| BP | GO:0006595 | polyamine metabolic process | IEP | HCCA |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | HCCA |
| BP | GO:0006777 | Mo-molybdopterin cofactor biosynthetic process | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0009309 | amine biosynthetic process | IEP | HCCA |
| BP | GO:0009445 | putrescine metabolic process | IEP | HCCA |
| BP | GO:0009446 | putrescine biosynthetic process | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016813 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| BP | GO:0019720 | Mo-molybdopterin cofactor metabolic process | IEP | HCCA |
| BP | GO:0032324 | molybdopterin cofactor biosynthetic process | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| BP | GO:0042401 | biogenic amine biosynthetic process | IEP | HCCA |
| BP | GO:0043545 | molybdopterin cofactor metabolic process | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0051189 | prosthetic group metabolic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 72 | 139 |
| No external refs found! |