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  5. Tin_g38535

Tin_g38535 (RD19A, RD19)


Aliases : RD19A, RD19

Description : EC_3.4 hydrolase acTing on peptide bond (peptidase) & original description: none


Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g38535

Target Alias Description ECC score Gene Family Method Actions
AT3G43960 No alias Cysteine proteinases superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G11310 No alias Papain family cysteine protease 0.01 OrthoFinder output from all 47 species
AT4G23520 No alias Cysteine proteinases superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g055646 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ala_g12318 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Als_g37910 XCP2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.06 OrthoFinder output from all 47 species
Als_g41015 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Aop_g11651 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04262.t1 XCP1, Aspi01Gene04262 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene04464.t1 XCP1, Aspi01Gene04464 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene40405.t1 RD21, RD21A,... EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Cba_g61743 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Dac_g27381 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dac_g38578 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dac_g39708 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Dcu_g01120 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Dde_g23863 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
GSVIVT01009796001 XBCP3 Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os04g57440.1 LOC_Os04g57440 Oryzain beta chain OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Lfl_g14951 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Lfl_g18880 XBCP3 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Lfl_g26175 XCP1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.01 OrthoFinder output from all 47 species
Msp_g11152 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Nbi_g17517 RD21, RD21A EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Nbi_g32515 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Pir_g23678 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Smo139792 No alias Caricain OS=Carica papaya 0.01 OrthoFinder output from all 47 species
Smo230602 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Solyc02g093040.4.1 RD21, RD21A,... Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc05g013920.4.1 Solyc05g013920 protease (Papain) 0.01 OrthoFinder output from all 47 species
Tin_g41717 RD21, RD21A EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Zm00001e006598_P002 Zm00001e006598 Oryzain beta chain OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e035458_P001 Zm00001e035458 Fruit bromelain OS=Ananas comosus (sp|o23791|brom1_anaco... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 9 64
IPR000668 Peptidase_C1A_C 90 123
No external refs found!