Tin_g38131 (MBD05, MBD5, ATMBD5)

Aliases : MBD05, MBD5, ATMBD5

Description : not classified & original description: none

Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g38131

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene12062.t1	ATMBD6, MBD6,...	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc11g073080.3.1	ATMBD7, MBD7,...	component MBD7 of ROS1-recruitment complex	0.03	OrthoFinder output from all 47 species
Spa_g18250	No alias	methylation reader *(MBD5-6) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	214	262

External Links

No external refs found!