Smo440352 (PACid_15404105)


Aliases : PACid_15404105

Description : 35.1.25 not assigned.no ontology.paired amphipathic helix repeat-containing protein Enhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19. SIN3-like 3 (SNL3) FUNCTIONS IN: transcription repressor activity INVOLVED IN: negative regulation of transcription, regulation of transcription, DNA-dependent, response to abscisic acid stimulus LOCATED IN: nucleus EXPRESSED IN: 22 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194), Paired amphipathic helix (InterPro:IPR003822) BEST Arabidopsis thaliana protein match is: SIN3-like 4 (TAIR:AT1G70060.1). & (chl4|521081 : 461.0


Gene families : OG_01_0000397 (Gene family) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo440352
Cluster HCCA cluster: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AT1G10450 SNL6 SIN3-like 6 0.03 Gene family
AT1G24190 SNL3, ATSIN3, SIN3 SIN3-like 3 0.02 Gene family
AT1G59890 SNL5 SIN3-like 5 0.03 Gene family
AT5G15020 SNL2 SIN3-like 2 0.02 Gene family
Cpa|evm.model.tig00001155.28 No alias 35.1.25 not assigned.no ontology.paired amphipathic... 0.01 Gene family
Cpa|evm.model.tig00021234.23 No alias 35.1.25 not assigned.no ontology.paired amphipathic... 0.01 Gene family
Cre03.g180800 No alias 35.1.25 not assigned.no ontology.paired amphipathic... 0.02 Gene family
LOC_Os01g01960 Os01g0109700 35.1.25 not assigned.no ontology.paired amphipathic... 0.02 Gene family
Solyc02g067570.3.1 Solyc02g067570.3 27.3.67 RNA.regulation of transcription.putative... 0.01 Gene family
Zm00001d008429 GRMZM2G334457 35.1.25 not assigned.no ontology.paired amphipathic... 0.02 Gene family
Zm00001d040123 GRMZM2G075320 35.1.25 not assigned.no ontology.paired amphipathic... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR031693 Sin3_C 955 1193
No external refs found!