Tin_g36753 (PEP)


Aliases : PEP

Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g36753

Target Alias Description ECC score Gene Family Method Actions
Adi_g011502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106357 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108733 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03129 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g16566 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Als_g19267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g25451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61202 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Aop_g19887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07339 HEN4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G023600.1 Ceric.14G023600 not classified & original description: pacid=50632924... 0.02 OrthoFinder output from all 47 species
Ceric.32G028300.1 Ceric.32G028300 not classified & original description: pacid=50598029... 0.03 OrthoFinder output from all 47 species
Dac_g16018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02923 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ehy_g04903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g25970.1 LOC_Os03g25970 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Lfl_g03080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_3715g0020 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
MA_6622g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g04932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10485 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g34355 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ore_g10011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16334 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008079 No alias not classified & original description: CDS=527-2194 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019575 No alias not classified & original description: CDS=226-2445 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020404 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Sam_g08472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13844 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Solyc05g007810.3.1 Solyc05g007810 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Solyc12g055780.3.1 Solyc12g055780 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Spa_g08106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53383 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e001825_P001 Zm00001e001825 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e004486_P005 Zm00001e004486 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e012623_P002 Zm00001e012623 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Zm00001e026127_P004 Zm00001e026127 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Zm00001e037033_P001 Zm00001e037033 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 153 201
No external refs found!