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  5. Smo439372

Smo439372 (PACid_15423288)


Aliases : PACid_15423288

Description : 34.23.1 transport.hormones.auxin N-MYC downregulated-like 2 (NDL2) CONTAINS InterPro DOMAIN/s: Pollen specific protein SF21 (InterPro:IPR015511), Ndr (InterPro:IPR004142) BEST Arabidopsis thaliana protein match is: N-MYC downregulated-like 1 (TAIR:AT5G56750.1) Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12 Bacteria - 1396 Metazoa - 17338 Fungi - 3422 Plants - 5037 Viruses - 0 Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os02g13150.1 : 328.0


Gene families : OG_01_0001221 (Gene family) Phylogenetic Tree(s): OG0001221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo439372
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01035359001 No alias 34.23.1 transport.hormones.auxin N-MYC... 0.04 Gene family
LOC_Os01g09670 Os01g0192600 34.23.1 transport.hormones.auxin N-MYC... 0.02 Gene family
LOC_Os05g10740 Os05g0196200 35.1 not assigned.no ontology N-MYC downregulated-like 1 (NDL1) 0.02 Gene family
Zm00001d039488 GRMZM2G413857 35.1 not assigned.no ontology N-MYC downregulated-like 1 (NDL1) 0.02 Gene family
Zm00001d046218 GRMZM2G467159 35.1 not assigned.no ontology N-MYC downregulated-like 1 (NDL1) 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004142 NDRG 38 326
No external refs found!