Tin_g36318

Description : component *(uL17m) of large mitoribosomal-subunit proteome & original description: none

Gene families : OG0002243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002243_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g36318

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0489.g073517	No alias	component *(uL17m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000663.20	No alias	50S ribosomal protein L17, chloroplastic OS=Spinacia oleracea	0.01	OrthoFinder output from all 47 species
LOC_Os01g62210.1	LOC_Os01g62210	component mtRPL17 of large ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
LOC_Os05g38580.1	LOC_Os05g38580	component mtRPL17 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Msp_g24171	No alias	component *(uL17m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Pir_g16791	No alias	component *(uL17m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Spa_g32541	No alias	component *(uL17m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
CC	GO:0016272	prefoldin complex	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000456	Ribosomal_L17	20	117

External Links

No external refs found!

Tin_g36318

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation