Tin_g36053


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g36053

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00210570 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
Adi_g096783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16781 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35868 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38429 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g03812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62553 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g24083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34218 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009167 No alias not classified & original description: CDS=1-2571 0.03 OrthoFinder output from all 47 species
Cba_g67304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.17G074800.1 Ceric.17G074800 not classified & original description: pacid=50618293... 0.04 OrthoFinder output from all 47 species
Ceric.36G058400.1 Ceric.36G058400 not classified & original description: pacid=50568396... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g05775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33014 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g33764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g51266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g45840.1 LOC_Os01g45840 Pentatricopeptide repeat-containing protein At2g36730... 0.04 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.03 OrthoFinder output from all 47 species
Len_g38488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23499 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_9463538g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Nbi_g04305 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15699 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004087 No alias not classified & original description: CDS=796-2982 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010805 VAC1, ECB2, ATECB2 not classified & original description: CDS=294-2756 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013079 No alias not classified & original description: CDS=41-367 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021224 No alias not classified & original description: CDS=1-2823 0.05 OrthoFinder output from all 47 species
Sam_g18667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo34638 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Tin_g05368 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016542_P001 Zm00001e016542 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Zm00001e032242_P001 Zm00001e032242 Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
Zm00001e032485_P001 EMB2744, Zm00001e032485 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e040418_P001 Zm00001e040418 Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 75 122
IPR002885 Pentatricopeptide_repeat 178 224
IPR002885 Pentatricopeptide_repeat 280 327
No external refs found!