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  5. Tin_g35915

Tin_g35915


Description : not classified & original description: none


Gene families : OG0000140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g35915
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Dcu_g32241 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g27770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g52424 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g19571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g28663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g35662 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009251 glucan catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030245 cellulose catabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030248 cellulose binding IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044247 cellular polysaccharide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051275 beta-glucan catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022234 DUF3759 18 106
No external refs found!