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  5. Tin_g35876

Tin_g35876


Description : component *(uL24) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000884 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000884_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g35876
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Ala_g37339 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g58453 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Gb_05675 No alias component RPL26 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pp3c14_25170V3.1 Pp3c14_25170 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Pp3c2_15910V3.1 Pp3c2_15910 Translation protein SH3-like family protein 0.01 OrthoFinder output from all 47 species
Ppi_g36832 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g05724 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc03g044000.1.1 Solyc03g044000 component RPL26 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Tin_g36430 No alias component *(uL24) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
CC GO:0015934 large ribosomal subunit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004312 fatty acid synthase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
IPR005824 KOW 51 82
No external refs found!