Smo438638 (PACid_15422621)


Aliases : PACid_15422621

Description : 27.3.20 RNA.regulation of transcription.G2-like transcription factor family, GARP Homeodomain-like superfamily protein CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287) BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G13640.2) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|512738 : 102.0


Gene families : OG_01_0000018 (Gene family) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo438638
Cluster HCCA cluster: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g33050 Os08g0426866 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
LOC_Os11g01480 Os11g0106100 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
LOC_Os12g01490 Os12g0105600 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_15920g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_636769g0010 No alias 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc10g078720.2.1 Solyc10g078720.2 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Solyc10g083340.2.1 Solyc10g083340.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Solyc10g085620.2.1 Solyc10g085620.2 27.3.25 RNA.regulation of transcription.MYB domain... 0.02 Gene family
Zm00001d026542 GRMZM2G124495 27.3.20 RNA.regulation of transcription.G2-like... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 55 105
No external refs found!