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  5. Tin_g34268

Tin_g34268


Description : component *(NRPC13/RPC82) of TFIIIe transcription factor module & original description: none


Gene families : OG0003612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003612_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g34268

Target Alias Description ECC score Gene Family Method Actions
Cre16.g673900 No alias RNA biosynthesis.RNA polymerase III-dependent... 0.01 OrthoFinder output from all 47 species
Mp5g03850.1 No alias component RPC82 of TFIIIe transcription factor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR008806 RNA_pol_III_Rpc82_C 156 381
IPR013197 RNA_pol_III_RPC82-rel_HTH 11 68
IPR024550 TFIIEa/SarR/Rpc3_HTH_dom 389 494
No external refs found!