Tin_g34089


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g34089
Cluster HCCA: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Adi_g002453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g012573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014847 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g021084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g023493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g045649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g054668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065636 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077328 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g102767 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02274 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04431 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07435 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19221 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03222 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06180 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08735 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21763 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23955 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26644 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0093.g043186 No alias not classified & original description: CDS=1-3252 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.04 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.03 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.03 OrthoFinder output from all 47 species
Cba_g05328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05975 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07653 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19873 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g46047 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67244 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67869 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.03 OrthoFinder output from all 47 species
Dac_g07110 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10603 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13392 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21332 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g22785 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28876 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g29239 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31479 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33753 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g01384 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g13517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29919 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g47068 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06184 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05241 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13202 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14856 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23960 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g24319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28104 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31613 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g35706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15170 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01966 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15137 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18859 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19560 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03925 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g05188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000390 No alias not classified & original description: CDS=1-1221 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005758 No alias not classified & original description: CDS=1-2499 0.06 OrthoFinder output from all 47 species
Sam_g09276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27503 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g18575 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23501 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25854 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54985 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56098 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56966 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02887 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g08736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09941 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10096 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12894 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15075 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g18900 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37478 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 609 657
IPR002885 Pentatricopeptide_repeat 725 771
IPR002885 Pentatricopeptide_repeat 390 436
IPR002885 Pentatricopeptide_repeat 1169 1216
IPR002885 Pentatricopeptide_repeat 843 889
IPR002885 Pentatricopeptide_repeat 1044 1065
IPR002885 Pentatricopeptide_repeat 493 523
IPR002885 Pentatricopeptide_repeat 583 607
IPR002885 Pentatricopeptide_repeat 298 320
IPR002885 Pentatricopeptide_repeat 1072 1102
No external refs found!