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  5. Smo437976

Smo437976 (PACid_15422003)


Aliases : PACid_15422003

Description : 27.3.42 RNA.regulation of transcription.Bromodomain proteins DNA-binding bromodomain-containing protein FUNCTIONS IN: DNA binding EXPRESSED IN: stem, male gametophyte, flower, carpel EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877) BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1) Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48 Bacteria - 2443 Metazoa - 11960 Fungi - 2852 Plants - 1222 Viruses - 306 Other Eukaryotes - 8352 (source: NCBI BLink). (original description: no original description)'


Gene families : OG_01_0002993 (Gene family) Phylogenetic Tree(s): OG0002993_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo437976
Cluster HCCA cluster: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT3G57980 No alias DNA-binding bromodomain-containing protein 0.02 Gene family
MA_135627g0010 No alias 27.3.42 RNA.regulation of transcription.Bromodomain... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001487 Bromodomain 658 737
No external refs found!