Smo437976 (PACid_15422003)


Aliases : PACid_15422003

Description : 27.3.42 RNA.regulation of transcription.Bromodomain proteins DNA-binding bromodomain-containing protein FUNCTIONS IN: DNA binding EXPRESSED IN: stem, male gametophyte, flower, carpel EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877) BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1) Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48 Bacteria - 2443 Metazoa - 11960 Fungi - 2852 Plants - 1222 Viruses - 306 Other Eukaryotes - 8352 (source: NCBI BLink). (original description: no original description)'


Gene families : OG_01_0002993 (Gene family) Phylogenetic Tree(s): OG0002993_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo437976
Cluster HCCA cluster: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT3G57980 No alias DNA-binding bromodomain-containing protein 0.02 Gene family
MA_135627g0010 No alias 27.3.42 RNA.regulation of transcription.Bromodomain... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001487 Bromodomain 658 737
No external refs found!