Aliases : PACid_15422003
Description : 27.3.42 RNA.regulation of transcription.Bromodomain proteins DNA-binding bromodomain-containing protein FUNCTIONS IN: DNA binding EXPRESSED IN: stem, male gametophyte, flower, carpel EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Bromodomain (InterPro:IPR001487), MYB-like (InterPro:IPR017877) BEST Arabidopsis thaliana protein match is: DNA-binding bromodomain-containing protein (TAIR:AT3G60110.1) Has 27183 Blast hits to 17808 proteins in 1233 species: Archae - 48 Bacteria - 2443 Metazoa - 11960 Fungi - 2852 Plants - 1222 Viruses - 306 Other Eukaryotes - 8352 (source: NCBI BLink). (original description: no original description)'
Gene families : OG_01_0002993 (Gene family) Phylogenetic Tree(s): OG0002993_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): Smo437976 | |
Cluster | HCCA cluster: Cluster_172 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G57980 | No alias | DNA-binding bromodomain-containing protein | 0.02 | Gene family | |
MA_135627g0010 | No alias | 27.3.42 RNA.regulation of transcription.Bromodomain... | 0.01 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001487 | Bromodomain | 658 | 737 |
No external refs found! |