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  5. Tin_g32703

Tin_g32703


Description : not classified & original description: none


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g32703

Target Alias Description ECC score Gene Family Method Actions
Adi_g078268 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35678 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32098.t1 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18506 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23248 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01038113001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038114001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os02g39330.1 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04060.1 LOC_Os03g04060 Chitinase 11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os05g04690.1 LOC_Os05g04690 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os05g33130.1 HCHIB, B-CHI,... Chitinase 2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_295712g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_44734g0010 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Mp2g21810.1 HCHIB, B-CHI,... Chitinase 1 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Mp4g01780.1 HCHIB, B-CHI,... Endochitinase CH5B OS=Phaseolus vulgaris... 0.03 OrthoFinder output from all 47 species
Ore_g30042 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60891 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0247.g026716 ATEP3, EP3,... not classified & original description: CDS=1-465 0.03 OrthoFinder output from all 47 species
Smo138198 CHI No description available 0.03 OrthoFinder output from all 47 species
Smo426710 No alias Endochitinase A OS=Zea mays 0.03 OrthoFinder output from all 47 species
Solyc02g082920.4.1 HCHIB, B-CHI,... Acidic 26 kDa endochitinase OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Solyc02g082930.3.1 HCHIB, B-CHI,... Acidic 27 kDa endochitinase OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc02g082960.3.1 HCHIB, B-CHI,... Basic endochitinase (Fragment) OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc07g009530.1.1 HCHIB, B-CHI,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g073353.1.1 Solyc10g073353 Endochitinase A OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc10g074440.2.1 HCHIB, B-CHI,... Endochitinase OS=Solanum tuberosum (sp|p05315|chit_soltu : 491.0) 0.02 OrthoFinder output from all 47 species
Solyc11g020530.3.1 HCHIB, B-CHI,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e000271_P001 HCHIB, B-CHI,... Chitinase 11 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e027534_P001 Zm00001e027534 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 104 142
No external refs found!