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  5. Tin_g32439

Tin_g32439


Description : not classified & original description: none


Gene families : OG0001713 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001713_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g32439
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Ala_g08770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0021.g015623 No alias not classified & original description: CDS=163-2334 0.03 OrthoFinder output from all 47 species
Cba_g17551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G056800.1 Ceric.14G056800 not classified & original description: pacid=50632955... 0.03 OrthoFinder output from all 47 species
Ceric.19G014600.1 Ceric.19G014600 not classified & original description: pacid=50575726... 0.04 OrthoFinder output from all 47 species
Ceric.1Z166000.1 Ceric.1Z166000 not classified & original description: pacid=50617128... 0.03 OrthoFinder output from all 47 species
Dac_g20856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR041617 TPR_MalT 303 458
No external refs found!