Tin_g32394


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g32394

Target Alias Description ECC score Gene Family Method Actions
Adi_g002365 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g055693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16765 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23926 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29297 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67712 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67745 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g28706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30164 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06287 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g02751 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04404 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g23128 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28352 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28728 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30376 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31780 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45774 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22160 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g23638 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g02244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35237 No alias ssDNA-binding protein *(OSB) & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 46 70
IPR002885 Pentatricopeptide_repeat 275 322
IPR002885 Pentatricopeptide_repeat 71 118
IPR002885 Pentatricopeptide_repeat 173 221
No external refs found!