Smo437676 (PACid_15419827)


Aliases : PACid_15419827

Description : 29.1.5 protein.aa activation.isoleucine-tRNA ligase ovule abortion 2 (OVA2) FUNCTIONS IN: in 6 functions INVOLVED IN: tRNA aminoacylation for protein translation, ovule development EXPRESSED IN: 22 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Plant disease resistance response protein (InterPro:IPR004265), Isoleucyl-tRNA synthetase (InterPro:IPR018353), Isoleucyl-tRNA synthetase, class Ia (InterPro:IPR002301), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Isoleucyl-tRNA synthetase, class Ia, N-terminal (InterPro:IPR015905), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain (InterPro:IPR010663), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding (InterPro:IPR013155), Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro:IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro:IPR002300) BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein


Gene families : OG_01_0005624 (Gene family) Phylogenetic Tree(s): OG0005624_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo437676
Cluster HCCA cluster: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT5G49030 OVA2 tRNA synthetase class I (I, L, M and V) family protein 0.09 Gene family
Cpa|evm.model.tig00000630.10 No alias 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.04 Gene family
Cre16.g689871 No alias 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.04 Gene family
GSVIVT01017762001 No alias 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.05 Gene family
LOC_Os02g53770 Os02g0778200 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.02 Gene family
MA_10436718g0010 No alias 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.03 Gene family
Solyc01g080810.3.1 Solyc01g080810.3 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.04 Gene family
Zm00001d018274 GRMZM2G478664 29.1.5 protein.aa activation.isoleucine-tRNA ligase... 0.05 Gene family

Type GO Term Name Evidence Source
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 15 104
No external refs found!