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  5. Tin_g30978

Tin_g30978


Description : not classified & original description: none


Gene families : OG0001150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g30978
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Ala_g27305 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000383.72 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000448.84 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.33 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020824.7 No alias 3-dehydrosphinganine reductase TSC10B OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dcu_g11159 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g11560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006302 No alias not classified & original description: CDS=31-663 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 12 195
No external refs found!