Tin_g30929


Description : not classified & original description: none


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g30929

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00134110 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Ala_g09174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010472 No alias not classified & original description: CDS=1-1746 0.03 OrthoFinder output from all 47 species
GSVIVT01005091001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01007589001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_14478 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g25877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10069 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g16677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44621 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g48688 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 162 191
IPR001680 WD40_repeat 197 233
IPR001680 WD40_repeat 319 334
IPR001680 WD40_repeat 251 282
No external refs found!