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Aliases : SHI
Description : SRS-type transcription factor & original description: none
Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g30774 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G19790 | SRS7 | SHI-related sequence 7 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G75520 | SRS5 | SHI-related sequence 5 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G51060 | SRS1, STY1 | Lateral root primordium (LRP) protein-related | 0.03 | OrthoFinder output from all 47 species | |
| AT4G36260 | SRS2, STY2 | Lateral root primordium (LRP) protein-related | 0.03 | OrthoFinder output from all 47 species | |
| AT5G66350 | SHI | Lateral root primordium (LRP) protein-related | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g061023 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g079607 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g17440 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27015 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035783 | SHI | SRS-type transcription factor & original description: CDS=1-2148 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0861.g090073 | SHI | SRS-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G095600.1 | SHI, Ceric.02G095600 | SRS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G028100.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G058400.1 | SRS1, STY1,... | SRS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g13440 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16665 | SRS1, STY1 | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g40676 | SHI | SRS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g30563 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g47477 | SHI | SRS-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01009812001 | SRS5 | RNA biosynthesis.transcriptional activation.SRS... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024206001 | SHI | RNA biosynthesis.transcriptional activation.SRS... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g31120 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g33081 | SHI | SRS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_2299g0010 | LRP1 | transcription factor (SRS) | 0.03 | OrthoFinder output from all 47 species | |
| Mp3g19510.1 | SHI | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g32313 | SHI | SRS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g26494 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16685 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59296 | SHI | SRS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007215 | SHI | SRS-type transcription factor & original description: CDS=1-2160 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0051.g013968 | SHI | SRS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g062400.3.1 | SRS1, STY1,... | transcription factor (SRS) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |