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  5. Tin_g30437

Tin_g30437


Description : not classified & original description: none


Gene families : OG0014133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g30437

Target Alias Description ECC score Gene Family Method Actions
Adi_g002830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16815 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17635 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G053800.1 Ceric.02G053800 not classified & original description: pacid=50584999... 0.06 OrthoFinder output from all 47 species
Ceric.12G001600.1 Ceric.12G001600 not classified & original description: pacid=50600619... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 134 181
IPR002885 Pentatricopeptide_repeat 373 421
IPR002885 Pentatricopeptide_repeat 236 283
IPR002885 Pentatricopeptide_repeat 341 371
IPR002885 Pentatricopeptide_repeat 313 338
IPR002885 Pentatricopeptide_repeat 449 475
IPR046848 E_motif 493 540
No external refs found!