Tin_g29004


Description : not classified & original description: none


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g29004

Target Alias Description ECC score Gene Family Method Actions
AT1G51570 No alias Calcium-dependent lipid-binding (CaLB domain) plant... 0.03 OrthoFinder output from all 47 species
AT3G61300 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 OrthoFinder output from all 47 species
Aev_g17253 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07946 QKY not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34872.t1 Aspi01Gene34872 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g023871 No alias not classified & original description: CDS=1-3048 0.03 OrthoFinder output from all 47 species
Ceric.04G011700.1 RPL10B, Ceric.04G011700 not classified & original description: pacid=50630755... 0.03 OrthoFinder output from all 47 species
Ceric.19G076300.1 Ceric.19G076300 not classified & original description: pacid=50576019... 0.05 OrthoFinder output from all 47 species
Ceric.22G069500.1 Ceric.22G069500 not classified & original description: pacid=50615182... 0.05 OrthoFinder output from all 47 species
Ceric.30G000500.1 Ceric.30G000500 not classified & original description: pacid=50608027... 0.05 OrthoFinder output from all 47 species
Dcu_g04914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028466001 No alias FT-interacting protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033529001 No alias FT-interacting protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_25152 No alias no description available(sp|q60ew9|ftip7_orysj : 1234.0) 0.04 OrthoFinder output from all 47 species
LOC_Os01g40480.1 QKY, LOC_Os01g40480 Protein QUIRKY OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os04g58720.1 LOC_Os04g58720 no description available(sp|q9m2r0|ftip3_arath : 1145.0) 0.01 OrthoFinder output from all 47 species
LOC_Os04g59520.1 LOC_Os04g59520 no description available(sp|q9m2r0|ftip3_arath : 977.0) 0.02 OrthoFinder output from all 47 species
LOC_Os05g30750.5 LOC_Os05g30750 no description available(sp|q60ew9|ftip7_orysj : 1527.0) 0.04 OrthoFinder output from all 47 species
Len_g04838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436836g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 197.0) 0.03 OrthoFinder output from all 47 species
Mp6g00440.1 No alias no description available(sp|q60ew9|ftip7_orysj : 926.0) 0.02 OrthoFinder output from all 47 species
Msp_g22780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g064230.3.1 Solyc09g064230 no description available(sp|q9m2r0|ftip3_arath : 978.0) 0.02 OrthoFinder output from all 47 species
Solyc10g080420.3.1 Solyc10g080420 no description available(sp|q9m2r0|ftip3_arath : 846.0) 0.03 OrthoFinder output from all 47 species
Spa_g07119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54189 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e016221_P001 Zm00001e016221 no description available(sp|q9m2r0|ftip3_arath : 957.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 612 767
IPR000008 C2_dom 200 307
IPR000008 C2_dom 43 138
IPR000008 C2_dom 357 467
No external refs found!