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  5. Tin_g28634

Tin_g28634


Description : methylation reader *(MBD10-11) & original description: none


Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g28634

Target Alias Description ECC score Gene Family Method Actions
Adi_g056752 No alias methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060317 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110470 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08851 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22478 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12114 MBD10 methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g37518 MBD10 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07494 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036046001 MBD11, ATMBD11 Methyl-CpG-binding domain-containing protein 10... 0.03 OrthoFinder output from all 47 species
Pir_g07032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11641 No alias methylation reader *(MBD10-11) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03856 MBD10 methylation reader *(MBD10-11) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04437 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47995 No alias methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 28 90
No external refs found!