1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g28498

Tin_g28498


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g28498
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00258490 ABCG14,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00214480 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00187570 ABCG26, WBC27,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00134p00069640 ABCG25,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Ala_g02542 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07219 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00019.t1 Aspi01Gene00019 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01671.t1 Aspi01Gene01671 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10922.t1 Aspi01Gene10922 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36520.t1 Aspi01Gene36520 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06567 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G008600.1 Ceric.13G008600 subfamily ABCG transporter & original description:... 0.01 OrthoFinder output from all 47 species
Dcu_g10865 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001660001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01014402001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_00289 ABCG26, WBC27 sporopollenin precursor exporter. subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Gb_31556 No alias subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
Gb_38402 ABCG14 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os06g40550.1 ABCG26, WBC27,... sporopollenin precursor exporter. subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Lfl_g30819 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39753 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g19930.1 ABCG26, WBC27 ABC transporter G family member 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp6g05900.1 ABCG14 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g31647 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35834 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06753 No alias sporopollenin precursor exporter *(ABCG26) & original... 0.02 OrthoFinder output from all 47 species
Solyc04g070970.4.1 Solyc04g070970 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc07g065780.2.1 ABCG26, WBC27,... ABC transporter G family member 26 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g23153 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28967 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21759 ABCG26, WBC27 subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 214 363
IPR013525 ABC_2_trans 548 757
No external refs found!