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  5. Tin_g28315

Tin_g28315


Description : regulatory protein ELP1 of PRC1 histone mono-ubiquiTination complex & original description: none


Gene families : OG0008546 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008546_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g28315
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Aop_g01393 No alias regulatory protein ELP1 of PRC1 histone... 0.11 OrthoFinder output from all 47 species
Aspi01Gene32678.t1 Aspi01Gene32678 regulatory protein ELP1 of PRC1 histone... 0.06 OrthoFinder output from all 47 species
Azfi_s0008.g011648 No alias regulatory protein ELP1 of PRC1 histone... 0.12 OrthoFinder output from all 47 species
Ceric.29G024200.1 Ceric.29G024200 regulatory protein ELP1 of PRC1 histone... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.19 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre16.g652950 No alias No description available 0.07 OrthoFinder output from all 47 species
Dac_g13525 No alias regulatory protein ELP1 of PRC1 histone... 0.14 OrthoFinder output from all 47 species
Gb_40172 No alias LHP1-regulatory component ELP1 of PRC1 histone... 0.14 OrthoFinder output from all 47 species
LOC_Os09g06560.1 LOC_Os09g06560 LHP1-regulatory component ELP1 of PRC1 histone... 0.05 OrthoFinder output from all 47 species
MA_10431892g0020 No alias LHP1-regulatory component ELP1 of PRC1 histone... 0.11 OrthoFinder output from all 47 species
Mp4g09220.1 No alias LHP1-regulatory component ELP1 of PRC1 histone... 0.11 OrthoFinder output from all 47 species
Nbi_g24640 No alias regulatory protein ELP1 of PRC1 histone... 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026104 No alias regulatory protein ELP1 of PRC1 histone... 0.08 OrthoFinder output from all 47 species
Sam_g08424 No alias regulatory protein ELP1 of PRC1 histone... 0.08 OrthoFinder output from all 47 species
Solyc03g114690.4.1 Solyc03g114690 LHP1-regulatory component ELP1 of PRC1 histone... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051095 regulation of helicase activity IEP HCCA
BP GO:0051097 negative regulation of helicase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1905462 regulation of DNA duplex unwinding IEP HCCA
BP GO:1905463 negative regulation of DNA duplex unwinding IEP HCCA
BP GO:1905774 regulation of DNA helicase activity IEP HCCA
BP GO:1905775 negative regulation of DNA helicase activity IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR022100 Mcl1_mid 427 712
IPR024977 Apc4_WD40_dom 218 289
IPR001680 WD40_repeat 154 190
IPR001680 WD40_repeat 70 105
No external refs found!