Tin_g28299 (RR12, ARR12)

Aliases : RR12, ARR12

Description : subgroup ARR-B transcription factor & original description: none

Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g28299

Target	Alias	Description	ECC score	Gene Family Method
AT4G31920	ARR10, RR10	response regulator 10	0.02	OrthoFinder output from all 47 species
Adi_g080126	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g08573	ARR11	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g20636	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g13514	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Aop_g13806	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g70563	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene31778.t2	RR12, ARR12,...	subgroup ARR-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0005.g009393	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Cba_g59744	RR14, ARR14	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.21G058200.1	RR12, ARR12,...	subgroup ARR-B transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g01716	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g39028	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g12820	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g00840	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01029177001	ARR10, RR10	RNA biosynthesis.transcriptional activation.ARR-B...	0.02	OrthoFinder output from all 47 species
Gb_37200	ARR1, RR1	B-type cytokinin ARR response activator. transcription...	0.03	OrthoFinder output from all 47 species
Mp4g20600.1	ARR1, RR1	B-type cytokinin ARR response activator. transcription...	0.04	OrthoFinder output from all 47 species
Msp_g35598	ARR1, RR1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g20473	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Ppi_g02280	ARR11	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g02524	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g37790	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Zm00001e013844_P002	RR12, ARR12,...	B-type cytokinin ARR response activator. transcription...	0.04	OrthoFinder output from all 47 species
Zm00001e016123_P001	RR12, ARR12,...	B-type cytokinin ARR response activator. transcription...	0.02	OrthoFinder output from all 47 species
Zm00001e031675_P001	Zm00001e031675	Transcription factor MYBC1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0004668	protein-arginine deiminase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005096	GTPase activator activity	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006596	polyamine biosynthetic process	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009309	amine biosynthetic process	IEP	HCCA
BP	GO:0009445	putrescine metabolic process	IEP	HCCA
BP	GO:0009446	putrescine biosynthetic process	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016813	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0042401	biogenic amine biosynthetic process	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0061630	ubiquitin protein ligase activity	IEP	HCCA
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
MF	GO:0140359	ABC-type transporter activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001789	Sig_transdc_resp-reg_receiver	14	123
IPR001005	SANT/Myb	201	251

External Links

No external refs found!

Tin_g28299 (RR12, ARR12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation