Tin_g27779


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g27779

Target Alias Description ECC score Gene Family Method Actions
AT1G08070 OTP82 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G39350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g049921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g074694 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101264 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17237 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02596 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05908 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07134 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26685 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33246 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59996 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g60944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62348 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03801 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g04440 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30400 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g35962 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14838.t1 Aspi01Gene14838 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36455.t1 CRR21, Aspi01Gene36455 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007907 No alias not classified & original description: CDS=160-2841 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011229 No alias not classified & original description: CDS=1-2535 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044025 No alias not classified & original description: CDS=1-2481 0.02 OrthoFinder output from all 47 species
Azfi_s0197.g057350 No alias not classified & original description: CDS=1-2067 0.02 OrthoFinder output from all 47 species
Cba_g02672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18809 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20783 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g30018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G027500.1 Ceric.03G027500 not classified & original description: pacid=50572299... 0.04 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.04 OrthoFinder output from all 47 species
Ceric.04G068300.1 CRR22, Ceric.04G068300 not classified & original description: pacid=50630217... 0.04 OrthoFinder output from all 47 species
Ceric.05G019900.1 CRR22, Ceric.05G019900 not classified & original description: pacid=50578663... 0.04 OrthoFinder output from all 47 species
Ceric.09G023600.1 Ceric.09G023600 not classified & original description: pacid=50587368... 0.04 OrthoFinder output from all 47 species
Ceric.10G043800.1 Ceric.10G043800 not classified & original description: pacid=50613534... 0.03 OrthoFinder output from all 47 species
Ceric.11G009800.1 Ceric.11G009800 not classified & original description: pacid=50594985... 0.03 OrthoFinder output from all 47 species
Ceric.1Z110500.1 Ceric.1Z110500 not classified & original description: pacid=50639205... 0.04 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.03 OrthoFinder output from all 47 species
Ceric.27G008800.1 VAC1, ECB2,... not classified & original description: pacid=50605786... 0.04 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.04 OrthoFinder output from all 47 species
Ceric.29G060200.1 Ceric.29G060200 not classified & original description: pacid=50624987... 0.05 OrthoFinder output from all 47 species
Ceric.33G002700.1 Ceric.33G002700 not classified & original description: pacid=50606600... 0.03 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.05 OrthoFinder output from all 47 species
Ceric.35G061000.1 CRR22, Ceric.35G061000 not classified & original description: pacid=50581720... 0.04 OrthoFinder output from all 47 species
Ceric.37G053600.1 Ceric.37G053600 not classified & original description: pacid=50616731... 0.04 OrthoFinder output from all 47 species
Dac_g04194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05153 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23537 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27646 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39275 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08260 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43323 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03965 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05964 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22176 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28915 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19453 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g43892 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04862 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07835 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14836 OTP80 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g02461 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17589 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g19110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26428 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35356 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48061 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04978 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06768 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08794 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10308 EMB2261 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g10800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15839 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22679 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09916 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18545 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40943 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41731 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43227 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g01848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03406 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13547 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13575 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g48319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49579 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57464 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57980 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63496 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03881 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03900 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06822 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13232 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18089 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g46357 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo101245 CRR2 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Solyc11g065250.1.1 EMB2744, Solyc11g065250 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14555 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14608 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21107 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21545 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g21634 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g23700 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23796 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23969 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g26518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26788 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45669 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46893 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54669 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.02 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 124 172
IPR002885 Pentatricopeptide_repeat 201 223
IPR002885 Pentatricopeptide_repeat 2 19
IPR002885 Pentatricopeptide_repeat 24 53
No external refs found!