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  5. Tin_g27372

Tin_g27372


Description : not classified & original description: none


Gene families : OG0005000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g27372
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT2G32640 No alias Lycopene beta/epsilon cyclase protein 0.05 OrthoFinder output from all 47 species
Adi_g015811 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g07877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13267 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g16632 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G032900.1 Ceric.08G032900 not classified & original description: pacid=50638882... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021441.9 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g02842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03750 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
LOC_Os08g32630.1 LOC_Os08g32630 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g01577 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0159.g023813 No alias RsmD-type rRNA methyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g11865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g102950.3.1 Solyc01g102950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g51272 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e022396_P002 Zm00001e022396 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!