Tin_g26992


Description : mitochondrial RNA splicing factor *(ABO5) & original description: none


Gene families : OG0005617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005617_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26992

Target Alias Description ECC score Gene Family Method Actions
Adi_g014392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20164 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Als_g04436 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Als_g56987 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Aop_g09293 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene24227.t1 Aspi01Gene24227 mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Ceric.08G062900.1 Ceric.08G062900 mitochondrial RNA splicing factor *(ABO5) & original... 0.06 OrthoFinder output from all 47 species
Dac_g45786 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.05 OrthoFinder output from all 47 species
Dde_g24980 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Gb_30527 ABO5 ABO5 mitochondrial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Lfl_g34233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433402g0010 ABO5 ABO5 mitochondrial RNA splicing factor 0.02 OrthoFinder output from all 47 species
MA_90107g0010 No alias Pentatricopeptide repeat-containing protein At1g05600... 0.04 OrthoFinder output from all 47 species
Msp_g15383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07928 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020774 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s3707.g028947 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species
Spa_g04254 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.03 OrthoFinder output from all 47 species
Tin_g10630 No alias mitochondrial RNA splicing factor *(ABO5) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 572 621
IPR002885 Pentatricopeptide_repeat 642 690
IPR002885 Pentatricopeptide_repeat 541 569
IPR002885 Pentatricopeptide_repeat 509 531
IPR033443 PPR_long 293 464
No external refs found!