Tin_g26904


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26904

Target Alias Description ECC score Gene Family Method Actions
AT4G33170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G65570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g002823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13294 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26696 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32791 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35870 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37466 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04456 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30430 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30788 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37100 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08796 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18614 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g32927 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000442 No alias not classified & original description: CDS=1-3240 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009167 No alias not classified & original description: CDS=1-2571 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044113 No alias not classified & original description: CDS=1-1752 0.03 OrthoFinder output from all 47 species
Azfi_s0136.g050953 No alias not classified & original description: CDS=1-2220 0.04 OrthoFinder output from all 47 species
Cba_g07412 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.03 OrthoFinder output from all 47 species
Ceric.04G079600.1 OTP84, Ceric.04G079600 not classified & original description: pacid=50631214... 0.05 OrthoFinder output from all 47 species
Ceric.07G024400.1 Ceric.07G024400 not classified & original description: pacid=50626298... 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.03 OrthoFinder output from all 47 species
Ceric.11G009800.1 Ceric.11G009800 not classified & original description: pacid=50594985... 0.06 OrthoFinder output from all 47 species
Ceric.13G057100.1 Ceric.13G057100 not classified & original description: pacid=50635531... 0.02 OrthoFinder output from all 47 species
Ceric.36G060000.1 Ceric.36G060000 not classified & original description: pacid=50568455... 0.04 OrthoFinder output from all 47 species
Ceric.37G044800.1 Ceric.37G044800 not classified & original description: pacid=50617007... 0.03 OrthoFinder output from all 47 species
Dac_g18777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42645 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04808 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07034 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07100 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07145 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07745 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08305 OTP86 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g08949 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08961 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g09000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16658 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g16956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35895 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g35980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39614 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40966 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g43193 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45849 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g47851 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g51572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04388 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31683 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16902 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011501001 No alias Pentatricopeptide repeat-containing protein At5g39350... 0.03 OrthoFinder output from all 47 species
GSVIVT01027525001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
LOC_Os03g63260.3 LOC_Os03g63260 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os07g10400.1 CRR22, LOC_Os07g10400 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g25280.1 LOC_Os08g25280 Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33700.1 LOC_Os08g33700 Pentatricopeptide repeat-containing protein At3g47530... 0.03 OrthoFinder output from all 47 species
Len_g03390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18982 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26301 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19657 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g02083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44930 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46086 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g02383 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06751 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08329 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11918 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13682 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27739 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32180 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12220 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13575 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07605 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10206 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35865 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g35991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53028 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55201 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g06265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g053520.2.1 SLO1, Solyc07g053520 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Spa_g12845 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g13891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47167 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53284 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20961 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034478_P001 Zm00001e034478 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
Zm00001e039394_P003 Zm00001e039394 Pentatricopeptide repeat-containing protein At5g04780,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 638 660
IPR002885 Pentatricopeptide_repeat 741 765
IPR002885 Pentatricopeptide_repeat 358 404
IPR002885 Pentatricopeptide_repeat 663 711
IPR002885 Pentatricopeptide_repeat 562 608
IPR002885 Pentatricopeptide_repeat 256 301
IPR002885 Pentatricopeptide_repeat 154 199
IPR002885 Pentatricopeptide_repeat 459 506
IPR032867 DYW_dom 879 971
IPR046848 E_motif 782 840
No external refs found!