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  5. Tin_g26895

Tin_g26895


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26895

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00084250 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g27110... 0.02 OrthoFinder output from all 47 species
Als_g22355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07964 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19862 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70728 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0035.g025580 No alias not classified & original description: CDS=174-2462 0.04 OrthoFinder output from all 47 species
Ceric.04G036800.1 Ceric.04G036800 not classified & original description: pacid=50632550... 0.02 OrthoFinder output from all 47 species
Ceric.04G095300.1 OTP84, Ceric.04G095300 not classified & original description: pacid=50630887... 0.02 OrthoFinder output from all 47 species
Ceric.22G078800.1 Ceric.22G078800 not classified & original description: pacid=50613807... 0.04 OrthoFinder output from all 47 species
Ceric.33G050800.1 CRR22, Ceric.33G050800 not classified & original description: pacid=50606654... 0.02 OrthoFinder output from all 47 species
Ceric.36G048100.1 Ceric.36G048100 not classified & original description: pacid=50568569... 0.04 OrthoFinder output from all 47 species
Dcu_g23524 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15390 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g36299 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01005577001 EMB2261 RNA processing.organelle machineries.RNA... 0.06 OrthoFinder output from all 47 species
Gb_06361 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
LOC_Os03g63560.1 LOC_Os03g63560 OTP70 plastidial RNA splicing factor 0.06 OrthoFinder output from all 47 species
Len_g05370 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33773 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g22255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35921 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g43481 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53029 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53937 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59299 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g59920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001819 OTP86 not classified & original description: CDS=1-3381 0.02 OrthoFinder output from all 47 species
Smo108652 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Solyc09g015370.1.1 Solyc09g015370 Pentatricopeptide repeat-containing protein At2g27610... 0.06 OrthoFinder output from all 47 species
Spa_g16702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 95 120
IPR002885 Pentatricopeptide_repeat 201 225
IPR002885 Pentatricopeptide_repeat 607 630
IPR002885 Pentatricopeptide_repeat 507 529
IPR002885 Pentatricopeptide_repeat 329 375
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 227 273
IPR002885 Pentatricopeptide_repeat 434 477
IPR002885 Pentatricopeptide_repeat 532 580
No external refs found!