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  5. Tin_g26717

Tin_g26717 (HVA22F)


Aliases : HVA22F

Description : not classified & original description: none


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26717

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00257430 ATHVA22A,... HVA22-like protein a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g51290.1 ATHVA22A,... HVA22-like protein a OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp1g15330.1 HVA22E, ATHVA22E HVA22-like protein f OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sam_g18301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo405070 ATHVA22A, HVA22A HVA22-like protein a OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc03g116350.3.1 ATHVA22A,... HVA22-like protein a OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 57 132
No external refs found!