Tin_g26549


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26549

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00031610 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Adi_g007782 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g022043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107292 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15743 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30202 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27882 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08782 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09162 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14024 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16814 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18707 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20132 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20359 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23677 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26859 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28684 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69562 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03951.t1 Aspi01Gene03951 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49892.t2 Aspi01Gene49892 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66060.t1 Aspi01Gene66060 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0126.g048645 No alias not classified & original description: CDS=1-2262 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060212 CRR22 not classified & original description: CDS=1-2343 0.04 OrthoFinder output from all 47 species
Cba_g04704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G087600.1 OTP84, Ceric.11G087600 not classified & original description: pacid=50595872... 0.03 OrthoFinder output from all 47 species
Ceric.24G003700.1 Ceric.24G003700 not classified & original description: pacid=50629583... 0.03 OrthoFinder output from all 47 species
Ceric.28G037300.1 Ceric.28G037300 not classified & original description: pacid=50570602... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.200 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g03777 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30157 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39511 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04808 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07075 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07745 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16808 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51083 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12887 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15529 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15555 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15898 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26859 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015461001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os02g49830.1 LOC_Os02g49830 Pentatricopeptide repeat-containing protein At3g22690... 0.03 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.03 OrthoFinder output from all 47 species
Len_g05304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19878 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05649 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06167 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07754 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29257 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g32914 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25096 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32016 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g01899 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22460 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g05188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16586 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17546 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g52106 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57968 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63640 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15155 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08728 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13844 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g23589 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59877 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002764 No alias not classified & original description: CDS=1-2754 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003060 No alias not classified & original description: CDS=1-2058 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009681 No alias not classified & original description: CDS=1-2907 0.03 OrthoFinder output from all 47 species
Sam_g01598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo96927 EMB2758 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38609 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 511 534
IPR002885 Pentatricopeptide_repeat 237 265
IPR002885 Pentatricopeptide_repeat 308 329
IPR002885 Pentatricopeptide_repeat 208 232
IPR002885 Pentatricopeptide_repeat 561 607
IPR002885 Pentatricopeptide_repeat 436 483
IPR002885 Pentatricopeptide_repeat 334 377
No external refs found!