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  5. Tin_g26287

Tin_g26287 (EMB1395, ATSAHH1,...)


Aliases : EMB1395, ATSAHH1, MEE58, SAHH1, HOG1

Description : EC_3.3 hydrolase acTing on ether bond & original description: none


Gene families : OG0002000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26287

Target Alias Description ECC score Gene Family Method Actions
Aop_g27407 EMB1395,... EC_3.3 hydrolase acting on ether bond & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.69 EMB1395,... Adenosylhomocysteinase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g05173 EMB1395,... EC_3.3 hydrolase acting on ether bond & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR015878 Ado_hCys_hydrolase_NAD-bd 312 475
IPR000043 Adenosylhomocysteinase-like 85 556
No external refs found!