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  5. Tin_g26285

Tin_g26285 (ATHMOV34, AE3, RPN8A)


Aliases : ATHMOV34, AE3, RPN8A

Description : regulatory component *(RPN8) of 26S proteasome & original description: none


Gene families : OG0003941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26285
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00224040 ATHMOV34, AE3,... Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Aop_g19244 ATHMOV34, AE3, RPN8A regulatory component *(RPN8) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000403.78 MEE34 Protein degradation.26S proteasome.regulatory... 0.01 OrthoFinder output from all 47 species
Cre06.g278256 MEE34 Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
Dac_g00587 ATHMOV34, AE3, RPN8A regulatory component *(RPN8) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dde_g07883 ATHMOV34, AE3, RPN8A regulatory component *(RPN8) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
GSVIVT01033994001 ATHMOV34, AE3, RPN8A Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Gb_05727 MEE34 regulatory component RPN8 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp1g16680.1 ATHMOV34, AE3, RPN8A regulatory component RPN8 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Msp_g01997 ATHMOV34, AE3, RPN8A regulatory component *(RPN8) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Nbi_g02923 ATHMOV34, AE3, RPN8A regulatory component *(RPN8) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ore_g02078 ATHMOV34, AE3, RPN8A regulatory component *(RPN8) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Sam_g38915 No alias regulatory component *(RPN8) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Spa_g17475 ATHMOV34, AE3, RPN8A regulatory component *(RPN8) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Zm00001e041848_P003 ATHMOV34, AE3,... regulatory component RPN8 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR024969 Rpn11/EIF3F_C 244 355
IPR000555 JAMM/MPN+_dom 85 195
No external refs found!