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  5. Tin_g26046

Tin_g26046


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g26046

Target Alias Description ECC score Gene Family Method Actions
Aev_g38912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g39387 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32427 No alias regulatory protein *(RLD) of gravity sensing & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G007900.1 Ceric.33G007900 not classified & original description: pacid=50607060... 0.04 OrthoFinder output from all 47 species
Dac_g12357 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os04g58960.1 PRAF1, LOC_Os04g58960 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os05g46740.1 LOC_Os05g46740 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Len_g02424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g28188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013591 Brevis_radix_dom 1044 1097
IPR000408 Reg_chr_condens 604 651
IPR000408 Reg_chr_condens 434 483
IPR000408 Reg_chr_condens 498 547
IPR000408 Reg_chr_condens 381 430
IPR000408 Reg_chr_condens 550 599
IPR000408 Reg_chr_condens 330 378
IPR027988 BRX_N 905 935
IPR000306 Znf_FYVE 655 721
No external refs found!