Aliases : SWI3A, CHB1, ATSWI3A
Description : SMARCC component *(SWI3) of chromaTin remodeling complex & original description: none
Gene families : OG0000817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000817_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g26033 | |
Cluster | HCCA: Cluster_73 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G21700 | CHB4, SWI3C, ATSWI3C | SWITCH/sucrose nonfermenting 3C | 0.03 | OrthoFinder output from all 47 species | |
Adi_g014216 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g13215 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.04 | OrthoFinder output from all 47 species | |
Als_g16238 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000388.52 | CHB4, SWI3C, ATSWI3C | Chromatin organisation.chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g24188 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os11g08080.1 | CHB4, SWI3C,... | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
Len_g07560 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
Len_g14234 | CHB4, SWI3C, ATSWI3C | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g08236 | CHB3, ATSWI3D | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
Mp8g15610.1 | SWI3A, CHB1, ATSWI3A | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g56590 | SWI3A, CHB1, ATSWI3A | SMARCC component *(SWI3) of chromatin remodeling complex... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g097450.4.1 | SWI3A, CHB1,... | component BAF255/170 of chromatin remodeling complex | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
CC | GO:0005956 | protein kinase CK2 complex | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0019207 | kinase regulator activity | IEP | HCCA |
MF | GO:0019887 | protein kinase regulator activity | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
MF | GO:0042393 | histone binding | IEP | HCCA |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
CC | GO:0070531 | BRCA1-A complex | IEP | HCCA |
CC | GO:0070552 | BRISC complex | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1902554 | serine/threonine protein kinase complex | IEP | HCCA |
CC | GO:1902911 | protein kinase complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
No external refs found! |